25 Jul HOW MANY BONDS ARE THERE BETWEEN NEIGHBORING AMINO ACIDS?
It is important to evaluate the length of a polymer for many applications such as effective Show more Q2. It is important to evaluate the length of a polymer for many applications such as effective polymer separation and molecular design. If a polymer is in the extended form please use the following worksheet to roughly estimate (no need to be accurate) the distance between two adjacent bases in a single-stranded DNA PNA and the distance between two adjacent residues (side chains) in a polypeptide. Please use nanometer (nm) as the unit. You can find the various bond lengths and bond angles from any sources. But you can also use bond data from these sources: 1) http://prowl.rockefeller.edu/aainfo/bond.htm; http://prowl.rockefeller.edu/aainfo/contents.htm; and www.notahelix.com/manuscripts/protamine_dna_structure.pdf for the paper in Journal of theoretical Biology 241 (2006) 533-540. From references what is the average length of various bonding? _____. From references what is the average angle between adjacent bonds? ____. DNA: How many bonds are there between neighboring nucleotides?____. What is the length between neighboring nucleotides? _______. PNA: How many bonds are there between neighboring nucleotides?____. What is the length between neighboring nucleotides? _______. Peptide: How many bonds are there between neighboring amino acids?____. What is the length between neighboring amino acids? _______. Please compare the similarity of unit length between DNA PNA and peptide. _____. Show less
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